PRIMER PICKING RESULTS FOR NM_006162_1p1 Using mispriming library /data/utswmc/elxr/ELXR-main/repbase/humrep_and_simple.fa Using 0-based sequence positions NO PRIMERS FOUND SEQUENCE SIZE: 1180 INCLUDED REGION SIZE: 1180 TARGETS (start, len)*: 269,400 EXCLUDED REGIONS (start, len)*: 0,0 969,211 0 gttcgcccccgtttcccccgccagccccagcgcccccctgcccggcccccggattccccg 60 ttcccgcccctacgcccccatcccctccccgtgcgcccctccccgtgcgcccccctcccc 120 gtgcgccccccctccccgtgcgcccccctccccgtgcgccccccctccccgggcgccccc 180 ctccccgggcgccccccctccccgtgcgcccccccctccccgtgcgccccccctccccgt 240 gcgcgccccgcctcttgcgcccctgcccccaggcgagcggctgccgcggcgcggggaggG ******************************* 300 GCGGGCGCTCGGCGACTCGTCCCCGGGGCCCCGCGCGGGCCCGGGCAGCAGGGGCGTGAT ************************************************************ 360 GTCACGGCAGGGAGGGGGCGCGGGAGCCGCCGGGCCGGCGGGGAGGCGGGGGAGGTGTTT ************************************************************ 420 TCCAGCTTTAAAAAGGCAGGAGGCAGAGCGCGGCCCTGCGTCAGAGCGAGACTCAGAGGC ************************************************************ 480 TCCGAACTCGCCGGCGGAGTCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGGCACCGGGG ************************************************************ 540 CGCGGGCAGGGCTCGGAGCCACCGCGCAGGTCCTAGGGCCGCGGCCGGGCCCCGCCACGC ************************************************************ 600 GCGCACACGCCCCTCGATGACTTTCCTCCGGGGCGCGCGGCGCTGAGCCCGGGGCGAGGG ************************************************************ 660 CTGTCTTCCCGGAGACCCGACCCCGGCAGCGCGGGGCGGCCGCTTCTCCTGTGCCTCCGC ********* 720 CCGCCGCTCCACTCCCCGCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT 780 CCAAGTTTCCACTTGGCCCTGCGGCTGCGGTCTTCGGGAGAGGAGAAACTTTGGGGCCCG 840 CGCCGCGCGCCGGCGGCACCATGAAGTCAGCGGAGGAAGgtaagccccgcgcggcctccg 900 cccccggacccctgcgccccccacggcccgggccgcgccccccgaccccgcccccgtcgc 960 ccgcacggaggggtccgggccagagaacgaggtcggccgggtctgtgcgcccagggaggg XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1020 gcgcggcgcggaccgggaacggcgtcccccagctcccagcagcccggttccgagcgcgcc XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1080 ttctgccaataggtgtctcctctgccccagcgctgagggcgcgaggcgaggccgccgcgg XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1140 gtcccgccgaggaagcggctcgcaggccggcgatttgggg XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KEYS (in order of precedence): XXXXXX excluded region ****** target Statistics con too in in no tm tm high high high high sid many tar excl bad GC too too any 3' lib poly end ered Ns get reg GC% clamp low high compl compl sim X stab ok Left 1988 0 0 0 1987 0 0 0 0 0 0 0 0 1 Right 2237 0 0 218 1647 0 0 0 0 92 9 0 32 239 Pair Stats: considered 239, unacceptable product size 239, ok 0 primer3 release 1.0