Predicted Exon Structure from Alignment [mouse-click blocks for primer design output]
#EXON1 PCR/seq primers #EXON2 PCR/seq primers NM_006162_3.out PCR/seq primers NM_006162_4.out PCR/seq primers NM_006162_5.out PCR/seq primers NM_006162_6.out PCR/seq primers NM_006162_7.out PCR/seq primers NM_006162_8.out PCR/seq primers NM_006162_9.out PCR/seq primers #EXON10 PCR/seq primers
                                                       133569 bp 


gi|27502384|ref|NM_006162.3| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 2, mRNA



Putative Exons From Alignment:  10
Last Database Update:  Wed Jun 20 17:16:57 2007



  • All Exon Optimal Primer Pair Summary
  • Coding Exon Product Summary

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     Optimal Primer Pair Analysis
   
    
 
    

    

    
  
    
     
Exon 1, part 1
    
    
         		
  
    
  
    
     
Exon 1, part 2
    
    
         		
  
    
  
    
     
Exon 2, part 1
    
    
         		
  
    
  
    
     
Exon 2, part 2
    
    
         		
  
    
  
    
     
Exon 2, part 3
    
    
         		
  
    
  
    
     
Exon 3
    
    
         		
  
    
  
    
     
Exon 4
    
    
         		
  
    
  
    
     
Exon 5
    
    
         		
  
    
  
    
     
Exon 6
    
    
         		
  
    
  
    
     
Exon 7
    
    
         		
  
    
  
    
     
Exon 8
    
    
         		
  
    
  
    
     
Exon 9
    
    
         		
  
    
  
    
     
Exon 10, part 1
    
    
         		
  
    
  
    
     
Exon 10, part 2
    
    
         		
  
    
  
    
     
Exon 10, part 3
    
    
         		
  
    
  
    
     
Exon 10, part 4
    
    
         		
  
    
  
    
     
Exon 10, part 5
    
    
         		
  
    

    

    
  
    
   
    
     Genomic Parent & Coverage Information
   
    
 
    

    

  • Genomic Contig Source:  Human  genome database via NCBI Entrez Gene ID 4772
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  • mRNA/EST Coverage Based on Genomic Alignment: 99.18%	(unaligned query sequence)
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  • View mRNA/EST to genomic sequence alignment 

  • View NT_010879.15 (genomic w/ exons annotated)
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    Last modified: Wed Jul 18 07:19:25 2007