Predicted Exon Structure from Alignment [mouse-click blocks for primer design output]
#EXON1 PCR/seq primers NM_000438_2.out PCR/seq primers NM_000438_3.out PCR/seq primers #EXON4 PCR/seq primers
                                                       5352 bp 


gi|31563350|ref|NM_000438.3| Homo sapiens paired box gene 3 (Waardenburg syndrome 1) (PAX3), transcript variant PAX3A, mRNA



Putative Exons From Alignment:  4
Last Database Update:  Wed Jun 20 17:16:57 2007



  • All Exon Optimal Primer Pair Summary
  • Coding Exon Product Summary

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     Optimal Primer Pair Analysis
   
    
 
    

    

    
  
    
     
Exon 1, part 1
    
    
         		
  
    
  
    
     
Exon 1, part 2
    
    
         		
  
    
  
    
     
Exon 2
    
    
         		
  
    
  
    
     
Exon 3
    
    
         		
  
    
  
    
     
Exon 4, part 1
    
    
         		
  
    
  
    
     
Exon 4, part 2
    
    
         		
  
    

    

    
  
    
   
    
     Genomic Parent & Coverage Information
   
    
 
    

    

  • Genomic Contig Source:  Human  genome database via NCBI Entrez Gene ID 5077
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  • mRNA/EST Coverage Based on Genomic Alignment: 100%	
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  • View mRNA/EST to genomic sequence alignment 

  • View NT_005403.16 (genomic w/ exons annotated)
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    Last modified: Tue Jul 17 20:01:32 2007