To query all of the pre-computed human and mouse ELXR runs from all curated RefSeq mRNAs, go to the ELXRdb

>>Human genome build utilized: 36
>>Last ELXRdb Update: November 15, 2007
>>ELXRdb Statistics

  Input

Enter your input as:                                                Organism:
                




  Alignment Parameters

Minimum (E)xpectation value:

Minimum fraction of alignment identical to genomic

Minimum allowable exon size:  basepairs

Remove poly-A tails (Sim4 "P" option)   Use high small exon stringency (Sim4 "N" option)




  Primer Picking Parameters

Use additional filtering of primers with RepeatMasker libraries
No.to Return: Max 3' Stability:
Max Mispriming: Pair Max Mispriming:
Product Size Min: Opt: Max:
Primer Size Min: Opt: Max:
Primer Tm Min: Opt: Max:
Primer GC% Min: Opt: Max:
Max Self Complementarity: Max 3' Self Complementarity:
Max #N's: Max Poly-X:
CG Clamp: Max Tm Difference:


  Output Options

Output flanking sequence for genomic slice: nucleotides

Output flanking sequence for each exon: nucleotides

Sequence buffer between primer and exon: nucleotides

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ELXR has been run  [ 3007 ]  times since Feb. 21, 2003

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